CDS

Accession Number TCMCG057C25433
gbkey CDS
Protein Id XP_018492392.1
Location complement(join(22543121..22543165,22543269..22543442,22543734..22543874,22544311..22544418,22544580..22544706,22544799..22544867,22544948..22545056,22545409..22545537,22545628..22545934,22546010..22546078,22546361..22546719,22546842..22546918,22547145..22547332,22547464..22547747,22547841..22548003,22548181..22548746,22548842..22549028,22549133..22549315,22549450..22549567,22550043..22550140,22550280..22550384,22550498..22550583,22550677..22550834,22550993..22551050,22551130..22551376,22551457..22551801))
Gene LOC108862679
GeneID 108862679
Organism Raphanus sativus

Protein

Length 1499aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018636890.1
Definition PREDICTED: nuclear pore complex protein NUP160 isoform X1 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category UY
Description Nuclear pore complex protein NUP160
KEGG_TC 1.I.1
KEGG_Module M00427        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K14303        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03013        [VIEW IN KEGG]
map03013        [VIEW IN KEGG]
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005635        [VIEW IN EMBL-EBI]
GO:0005643        [VIEW IN EMBL-EBI]
GO:0006403        [VIEW IN EMBL-EBI]
GO:0006405        [VIEW IN EMBL-EBI]
GO:0006406        [VIEW IN EMBL-EBI]
GO:0006611        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006913        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009266        [VIEW IN EMBL-EBI]
GO:0009409        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009733        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0015931        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016973        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031503        [VIEW IN EMBL-EBI]
GO:0031965        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0050657        [VIEW IN EMBL-EBI]
GO:0050658        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051028        [VIEW IN EMBL-EBI]
GO:0051168        [VIEW IN EMBL-EBI]
GO:0051169        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051236        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071166        [VIEW IN EMBL-EBI]
GO:0071426        [VIEW IN EMBL-EBI]
GO:0071427        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAGTCGAATCGTCGGAGTTCGCCTGGCGGTATGGAGGTTCCAGTCGCAGGCGGCGGAAATGTCGTCAAGTGGCTCGATATATCCGTCCCTCCTCTTCCTCCTCCTTCTCCTTCTACGGAGGAGGACAATGGATACGTTCTCCTTCCTTCGTCGGAAGAAGACTACGCTTCGAGCTGTGTACTTGGCGAGCCTCCGATCTCTTTCGTTTGTAGAATCAACAAAACGAGGTCAAACGTTCTCGACCTTCTTCAGCTCTCTGCTAAATCTGGTTTTCCATTAACCGGGCTTCGTTTCGTCTTCGCTCACACCCTCTCTCCTTTCGCTTTTCTATCCGCCGACGAGGGAAGTGAGAGTGGTCGTCTCGTCTTCTTTCTCTACGCTCTCTCGCCATCTGGTGTTGTCTACGTCCTCAAAATCGAGAATACTTCGTCCTATAAGTCTGGCTCGGTCTTCCCGCTTGACCATCTGATCCACTTGAATGTTCGACCATACTTGAACGAAACTCATGTTACCAGTGTGGCTGCATCGCCTGGATTCCTTTTCCTTGGGAGATCAGATGGCTCTGTCTCTTCTTTCCAACCTGCATCAGGTTTCCACCAGGAGCTGCGTGATGATACAGGACTTGGTCGTCTTTGGGGTTTTGTAAGGGGGACAGTTGTTGCTGCCGTGCAAGATTTATGTATATCAGAAGTTTATGGAAGAAACTTGATATGCGTGCTTCATGCTGACGGGGGGTTACGTGTGTGGGACATTCTGACCTGTAGCAGGGTTTTGTGTCAGAGTATAGCTGCTAAAAACGTTGAGGGGGTTGTGTGTCTGAGGTTATGGTTGGGCAAAGTTGATTACGTTAATGGCATCATTCCTTTAGCTGTCTTGTATAGGAATACTATGGGAGACAACGTGGACGTGATCACTGTATATGACCTGCACTTTAGTTCTGGGGAGAGGATAGCCTTGTCTCTGGATTCTGGACTACAGAATATTTCACTAGAAGGGGGGGAACTGCGGGATGTCAGATTTACTTCCGACGAGATTTGGACTCTGAAGACTGATGAATTGACATCTCACGTGTTGTACCAGAAATCTAGCACCATGGAAGCACGGTCTTACACTTTACAGGAGGAATACATTTCTGAACAGTTATTTCTGAGTGCTAGGAGCTCTTCGCATGACCTTCTTTTGACTTCACATTCACTTTTTTCATCCGCAAAGGATCAAATTATGGGATTCATTTCATCAGTCTTCTTACGTAGGCTTCTTTGTCCTGGAATTTTTCACACTGTTGCCTTGCGTCTAACTTTACGGGACCACAACAAACACTGGACTGATTCTGAATTTCAATCCTTAAGTCTTGATGAGCTTAAAAGCGAGATTCTTTTACTAGTTGAGGAAGAGGTTACTGGTGAGACTTCTATTTCAGTTTTTCACTGGTGGGAAAACTTTTGTTCGTGCTATCTTGATCACTGGTGCAACAATAACGAACCTTGCACGTTGTTGGTTCAGTCAGATGTTATTGGTTTAGTTAGAAACGATTCTGTATCACTGTTCTTTAGATCAGAGAACGTTGAGCACAGCCTTGGAGGATCTTCCTCCGAACACAGCAACCTGACAAGCTTAGGCTTTGGGATGTCTACCAATGAACATGGGATTCTGTCGGAGGTACTAAGATGTATTTCGAAGATCAATAAGCAGTGGGGTGCTGCTCCTTATGCCATGTATTATGAATCGGTTACTGGAAGGCCAGTTATATCATCTGAGGAAATTGTTCCTCGCTTAGTTAACATCCTTGAGTCGGGATATGCAATGTCCATAGGTCAGCGTACTTGGTCGGATCTTGGTGCTGATAGAGCACGGGACAAAGAGCTAGAAGCTCATAAAAATCTTAGAACATTCTCCATTGAAATGTTATTGTCTCTCTCTGCTCTATGTCAAAGGGCTGGATCTTGGGAAAAGGTTTTTACTATCATGGAGCACTATTTGCAGTATCTGGTCCCTAAGAAAGTTATGCATAACAATGATAGCGAGACATTATCAGATATCTGTAGTTCTATCCTTGTTCAAGCCACTTCTCAGTTTGCAAAGGTGATGTTTGAGTCTGCCATTGACATCTTCCTAATCGTCAGCTATCTGCTTAACATCTCCGGGCAGGTAAATATGTCACAGCAAGATATATGTAAGCTACGGCTGGAATTGCTTCCGATGATCCAAGATATTGTCTCAGAGTGGCTGATCATTCTTTTCTTTGTTACCACGCCGGCTCAATTGACTTCAGTGGAAGATTTCAGCTTTAAGCTCTCATCTCTTCAGATTGATAGCAGCATTGACAGAAGATCATGGAACACAATGCTTGGGAAATGCGGTTTCTCATTGGCGTATATTCTTCTTTTCAGTGACCGGAGTTGCAATGTGGATAGCCGATTTAACTGGATTCGACTTAGATATCTTCCAAGTTCACAAAGCATTACAAGCTTGGTACAAAACTTCATTAGCTGGATTCGTTATAGTAAAACTGGAGAGGACTCTTCTTCTTTGCTAAGACGCTCAACTGAGCTTACTCTTAGGTTGATTAGGAATGGACAGGCTGATGCTGTCGAGCGAATCCTTTTGATTGTCGAGGCAAGTTTACGTGGGGAGAAAACATTTGGACATGCCCAAGATACCAATGGAGATTGGTGTCTTCTTCAACATATCCGTGGTTGTTGCCTCCTTGATGAAGTGCAGCGTGGAGCGTGCGGGGTATTAAAAGAGAGAAAGATTAGTGATGCCATCCGCTGCTTCTTCAGAGCTTCATCAGGTGAAGGATCTTGGAAGGCTTTGCACAGCTTGGCTAAAGAAGCAGGATTTTCACATTCCACAATTGGTGCCAGTATTTCAGATGGTGAAAATTCTTGTGCCACATGGAAACTTCATTACTATGAATGGGCTATGCAAATTTTTGAACGGTACAATATAAGTGAAGGAGCTTGTCAGTTTGCGTACGCAGCCCTTGAGCAAGTAGATGAGGCCATTAATTTCATGGAGAGTAGTGAGAACGTCCATCCACCTGTAACAGCCACTTACTGTAGAGGACGACTGTGGGCAAATGTTTTCAAGTTCACGTTAGATCTGAATCTCTTGAATGATGCTTACTGCGCTATTATTTCGAACCCTGATGAGGAAATTAAGCGCATCTGTTTGAGGCGCTTCATAATAGTTCTATTTGAATGTGGCAAAACCAAGATCCTCATTGATGGACATCTGCCTTTCATCGGCTTATCAGAGAAGATCACCCAAGAGCTTTTTTGGAAGGCTGGGCGTTCCGAGATAATGATTAAGCCAAATCCATACAAGCTGCTTTATGCTTACGAGATGAAACGACACAATTGGCGAATGGCGGCAAGTTACATGTATCAGTTTTCTGCTCGTCTGAGAAGTGAGGCAGGATCCACGGATTATAAACACAAGACCCTAGTTTTGCAAGAGAGGCTTAATGGACTTTCTGCTGCTATAAATGCATTAAGTCTTGTGCATCCTGGGTATGCTTGGATTGATCCACTACCAGAAGAATCCATGCATTATCCAGCAAAAAAGGCTAAAAGAGTAGAAGAACAACAATCAGTAAGGAGTAATGACCAGCCCAAAGGGGATCAGAGTTGCATTGATATCGAGAAAATCCAAAACGAGTTTGTTTTCACTACAGCAGAATATCTGCTTTCTCTGAAAAACTTCGAGTGGACATATTCAGGGCTCGAAAAACCACCACCGGACTTGGTTGACCTTCTTGTCCAGGCAGACTTGTATGACATGGCATTCACTGTTGTTTTAAAATTTTGGAGAGGCTCAGCTTTGAAAAAGGAGCTGGAAAAGATATTTGAGAATATGGCAATAAGATGTTGCCCTGCTAAAGGAACGCTGTGGTCATCAAATGATCTCAGGCCTAATCTTATGTTAACATCTACGGAAGACGAAGTCACCCATTCGCCTGATAGAAGCCCTGCTGTTCAAAGCTCCAACTTGGCTGGTGACTGGGAAATTCTTGAGGTTTATCTTAAGAGGTACAAAGACATACACGCTAGATTGCCAGTTATTGTTGCTTCAACCCTTCTTCAGGCAGATTCTTGTATAGAGTTGCCTCTTTGGCTGGTTCACATGTTCAAGGATGGTAAGAAGGAGAAAGCTTTGGGAATGGGTGGGCAAGAAGCAAGTCCTGCTTCATTGTTTCAGTTATATGTTGACTATGGGCGTCTTTCAGAGGCCACTAATTTGCTATTGGAGTACATGGAATCATTTGCATCATCGAAACCAGCAGAGGTATTGAAAAGGAAAAAGGTATCAGGGGTTTGGTTTCCTTACACAACAGTGGAAAGACTATGGTGGGCGCTAGAGAAAACGATGAACTCAGGACGGATGCTGGAGCAGTGCCAGAAGCTTAAGGGACAACTCCAACAAGCGTTACTCAATCACTTAAAGCTGCTGAAGGTTGACTCGGATGATGCTGTGTCGTCTGCAGCTGGTTGA
Protein:  
MESNRRSSPGGMEVPVAGGGNVVKWLDISVPPLPPPSPSTEEDNGYVLLPSSEEDYASSCVLGEPPISFVCRINKTRSNVLDLLQLSAKSGFPLTGLRFVFAHTLSPFAFLSADEGSESGRLVFFLYALSPSGVVYVLKIENTSSYKSGSVFPLDHLIHLNVRPYLNETHVTSVAASPGFLFLGRSDGSVSSFQPASGFHQELRDDTGLGRLWGFVRGTVVAAVQDLCISEVYGRNLICVLHADGGLRVWDILTCSRVLCQSIAAKNVEGVVCLRLWLGKVDYVNGIIPLAVLYRNTMGDNVDVITVYDLHFSSGERIALSLDSGLQNISLEGGELRDVRFTSDEIWTLKTDELTSHVLYQKSSTMEARSYTLQEEYISEQLFLSARSSSHDLLLTSHSLFSSAKDQIMGFISSVFLRRLLCPGIFHTVALRLTLRDHNKHWTDSEFQSLSLDELKSEILLLVEEEVTGETSISVFHWWENFCSCYLDHWCNNNEPCTLLVQSDVIGLVRNDSVSLFFRSENVEHSLGGSSSEHSNLTSLGFGMSTNEHGILSEVLRCISKINKQWGAAPYAMYYESVTGRPVISSEEIVPRLVNILESGYAMSIGQRTWSDLGADRARDKELEAHKNLRTFSIEMLLSLSALCQRAGSWEKVFTIMEHYLQYLVPKKVMHNNDSETLSDICSSILVQATSQFAKVMFESAIDIFLIVSYLLNISGQVNMSQQDICKLRLELLPMIQDIVSEWLIILFFVTTPAQLTSVEDFSFKLSSLQIDSSIDRRSWNTMLGKCGFSLAYILLFSDRSCNVDSRFNWIRLRYLPSSQSITSLVQNFISWIRYSKTGEDSSSLLRRSTELTLRLIRNGQADAVERILLIVEASLRGEKTFGHAQDTNGDWCLLQHIRGCCLLDEVQRGACGVLKERKISDAIRCFFRASSGEGSWKALHSLAKEAGFSHSTIGASISDGENSCATWKLHYYEWAMQIFERYNISEGACQFAYAALEQVDEAINFMESSENVHPPVTATYCRGRLWANVFKFTLDLNLLNDAYCAIISNPDEEIKRICLRRFIIVLFECGKTKILIDGHLPFIGLSEKITQELFWKAGRSEIMIKPNPYKLLYAYEMKRHNWRMAASYMYQFSARLRSEAGSTDYKHKTLVLQERLNGLSAAINALSLVHPGYAWIDPLPEESMHYPAKKAKRVEEQQSVRSNDQPKGDQSCIDIEKIQNEFVFTTAEYLLSLKNFEWTYSGLEKPPPDLVDLLVQADLYDMAFTVVLKFWRGSALKKELEKIFENMAIRCCPAKGTLWSSNDLRPNLMLTSTEDEVTHSPDRSPAVQSSNLAGDWEILEVYLKRYKDIHARLPVIVASTLLQADSCIELPLWLVHMFKDGKKEKALGMGGQEASPASLFQLYVDYGRLSEATNLLLEYMESFASSKPAEVLKRKKVSGVWFPYTTVERLWWALEKTMNSGRMLEQCQKLKGQLQQALLNHLKLLKVDSDDAVSSAAG